Detailed information of matrix profile MA0534.1

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Profile summary
Name: EcR::usp
Matrix ID: MA0534.1
Class: Nuclear receptors with C4 zinc fingers::Nuclear receptors with C4 zinc fingers
Family:
Collection: CORE
Taxon: Insects
Species: Drosophila melanogaster
Data Type: ChIP-seq
Validation: 8649409
Uniprot ID: P20153   P34021  
Source:
Comment:

Sequence logo

Frequency matrix

         
A [ 29 60 19 5 9 12 74 34 0 0 66 49 21 0 24 ]
C [ 36 12 10 3 0 66 0 11 0 0 33 55 57 34 28 ]
G [ 39 32 75 35 0 0 30 5 0 104 0 0 0 0 0 ]
T [ 0 0 0 61 95 26 0 54 104 0 5 0 26 70 52 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0534.1 MA0534 1 EcR::usp Drosophila melanogaster
Nuclear receptors with C4 zinc fingers::Nuclear receptors with C4 zinc fingers
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: