Detailed information of matrix profile MA0543.1

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Profile summary
Name: eor-1
Matrix ID: MA0543.1
Class: C2H2 zinc finger factors
Family:
Collection: CORE
Taxon: Nematodes
Species: Caenorhabditis elegans
Data Type: ChIP-seq
Validation: 15355793
Uniprot ID: G5EDU4  
Source:
Comment:

Sequence logo

Frequency matrix

         
A [ 439 457 939 133 1206 100 1153 262 429 237 1184 74 1170 202 974 ]
C [ 169 133 89 2 1 0 12 597 44 547 41 28 3 336 26 ]
G [ 427 497 167 1113 0 1126 70 319 694 403 28 1151 74 686 184 ]
T [ 218 166 58 5 46 27 18 75 86 66 0 0 6 29 69 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0543.1 MA0543 1 eor-1 Caenorhabditis elegans
C2H2 zinc finger factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: