Detailed information of matrix profile MA0544.1

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Profile summary
Name: snpc-4
Matrix ID: MA0544.1
Class: Tryptophan cluster factors
Family: Myb/SANT domain factors
Collection: CORE
Taxon: Nematodes
Species: Caenorhabditis elegans
Data Type: ChIP-seq
Validation: 22345127
Uniprot ID: P91868  
Source:
Comment:

Sequence logo

Frequency matrix

         
A [ 90 3 0 2 3 8 4 12 0 10 0 39 ]
C [ 7 34 0 2 305 12 2 256 179 0 293 65 ]
G [ 175 3 310 0 0 278 299 15 30 296 1 37 ]
T [ 38 270 0 306 2 12 5 27 101 4 16 169 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0544.1 MA0544 1 snpc-4 Caenorhabditis elegans
Myb/SANT domain factors Tryptophan cluster factors
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0584.1

ChIP-seq Centrality
log(P-value): -581.424

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0584.1

ChIP-seq Centrality
log(P-value): -618.645

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: