Detailed information of matrix profile MA0546.1

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Profile summary
Name: pha-4
Matrix ID: MA0546.1
Class: Fork head / winged helix factors
Family: Forkhead box (FOX) factors
Collection: CORE
Taxon: Nematodes
Species: Caenorhabditis elegans
Data Type: ChIP-seq
Validation: 20623595
Uniprot ID: Q17381  
Source:
Comment:

Sequence logo

Frequency matrix

         
A [ 585 534 537 41 0 862 1010 1010 0 1010 ]
C [ 71 0 0 0 407 148 0 0 623 0 ]
G [ 0 471 79 969 0 0 0 0 0 0 ]
T [ 354 5 394 0 603 0 0 0 387 0 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0546.1 MA0546 1 pha-4 Caenorhabditis elegans
Forkhead box (FOX) factors Fork head / winged helix factors
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0552.1

ChIP-seq Centrality
log(P-value): -480.548

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0552.1

ChIP-seq Centrality
log(P-value): -221.392

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: