Detailed information of matrix profile MA0561.1

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Profile summary
Name: PIF4
Matrix ID: MA0561.1
Class: Basic helix-loop-helix factors (bHLH)
Family:
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: ChIP-seq
Validation: 22536829
Uniprot ID: Q8W2F3  
Source:
Comment:

Sequence logo

Frequency matrix

         
A [ 0 335 0 49 0 0 0 64 ]
C [ 335 0 335 0 0 0 99 206 ]
G [ 0 0 0 286 0 335 183 65 ]
T [ 0 0 0 0 335 0 53 0 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0561.1 MA0561 1 PIF4 Arabidopsis thaliana
Basic helix-loop-helix factors (bHLH)
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0557.1

ChIP-seq Centrality
log(P-value): -2595.65

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0557.1

ChIP-seq Centrality
log(P-value): -2646.92

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: