Detailed information of matrix profile MA0605.2

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Profile summary
Name: ATF3
Matrix ID: MA0605.2
Class: Basic leucine zipper factors (bZIP)
Family: Jun-related factors
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation: 12815047
Uniprot ID: P18847  
Source: 28473536
Comment:

Sequence logo

Frequency matrix

         
A [ 8505 24741 0 0 40546 0 891 0 1520 40546 0 6919 ]
C [ 8220 1354 0 0 0 40546 0 0 40546 0 15737 16820 ]
G [ 16894 15805 1 40546 0 0 40546 0 0 0 1094 8242 ]
T [ 6926 0 40546 1366 0 556 0 40546 0 0 24808 8564 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0605.1 MA0605 1 Atf3 Mus musculus
Fos-related factors Basic leucine zipper factors (bZIP)
MA0605.2 MA0605 2 ATF3 Homo sapiens
Jun-related factors Basic leucine zipper factors (bZIP)
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0003.2

ChIP-seq Centrality
log(P-value): -10781.5

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0003.2

ChIP-seq Centrality
log(P-value): -10844.4

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: