Detailed information of matrix profile MA0665.1

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Profile summary
Name: MSC
Matrix ID: MA0665.1
Class: Basic helix-loop-helix factors (bHLH)
Family: Tal-related factors
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation: 24175993
Uniprot ID: O60682  
Source: 23332764
Comment: Data is from Taipale HTSELEX DBD (2013)

Sequence logo

Frequency matrix

         
A [ 69 69 0 69 0 0 0 0 3 0 ]
C [ 0 12 69 0 12 69 0 0 10 9 ]
G [ 18 3 3 0 69 3 0 69 4 4 ]
T [ 7 0 1 0 0 0 69 4 69 69 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0665.1 MA0665 1 MSC Homo sapiens
Tal-related factors Basic helix-loop-helix factors (bHLH)
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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Symbol:

Consensus:

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GC Content: