Detailed information of matrix profile MA0672.1

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Profile summary
Name: NKX2-3
Matrix ID: MA0672.1
Class: Homeo domain factors
Family: NK-related factors
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation: 11042197
Uniprot ID: Q8TAU0  
Source: 23332764
Comment: Data is from Taipale HTSELEX DBD (2013)

Sequence logo

Frequency matrix

         
A [ 3572 2025 38 9278 8 0 0 4241 9278 3170 ]
C [ 2182 9278 9278 98 9278 0 939 1451 917 2754 ]
G [ 1989 4499 0 16 0 18 0 5037 1831 2788 ]
T [ 1535 140 132 250 0 9278 9278 343 2437 566 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0672.1 MA0672 1 NKX2-3 Homo sapiens
NK-related factors Homeo domain factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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Consensus:

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GC Content: