Detailed information of matrix profile MA0742.1

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Profile summary
Name: Klf12
Matrix ID: MA0742.1
Class: C2H2 zinc finger factors
Family: Three-zinc finger Krüppel-related factors
Collection: CORE
Taxon: Vertebrates
Species: Mus musculus
Data Type: HT-SELEX
Validation: 16266294
Uniprot ID: O35738  
Source: 23332764
Comment: Data is from Taipale HTSELEX DBD (2013)

Sequence logo

Frequency matrix

         
A [ 167 553 19 5 853 9 215 0 0 0 410 238 308 238 271 ]
C [ 35 11 668 670 27 675 1 687 706 715 120 219 239 186 210 ]
G [ 1158 531 8 12 2 0 1348 0 9 0 0 99 84 117 141 ]
T [ 225 0 9 3 0 4 16 4 13 13 483 403 290 429 330 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0742.1 MA0742 1 Klf12 Mus musculus
Three-zinc finger Krüppel-related factors C2H2 zinc finger factors
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0514.1

ChIP-seq Centrality
log(P-value): -1357.12

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0514.1

ChIP-seq Centrality
log(P-value): -1183.21

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: