Detailed information of matrix profile MA0784.1

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Profile summary
Name: POU1F1
Matrix ID: MA0784.1
Class: Homeo domain factors
Family: POU domain factors
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation: 2350782
Uniprot ID: P28069  
Source: 23332764
Comment: Data is from Taipale HTSELEX DBD (2013)

Sequence logo

Frequency matrix

         
A [ 1211 1128 276 2128 45 28 98 1267 2128 2128 76 222 2128 736 ]
C [ 247 123 83 14 74 11 2128 12 11 10 37 241 174 479 ]
G [ 273 187 108 32 26 2128 164 7 82 0 40 840 194 2128 ]
T [ 397 1000 2128 19 2128 176 536 861 85 3 2128 1287 273 547 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0784.1 MA0784 1 POU1F1 Homo sapiens
POU domain factors Homeo domain factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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