Detailed information of matrix profile MA0792.1

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Profile summary
Name: POU5F1B
Matrix ID: MA0792.1
Class: Homeo domain factors
Family: POU domain factors
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation: 2350782
Uniprot ID: Q06416  
Source: 23332764
Comment: Data is from Taipale HTSELEX DBD (2013)

Sequence logo

Frequency matrix

         
A [ 1326 9519 171 322 398 6299 9519 9519 1559 ]
C [ 1778 21 364 94 9519 51 144 65 537 ]
G [ 808 67 206 9519 1293 65 856 97 750 ]
T [ 9519 84 9519 1790 3828 3220 896 203 9519 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0792.1 MA0792 1 POU5F1B Homo sapiens
POU domain factors Homeo domain factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

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