Detailed information of matrix profile MA0816.1

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Profile summary
Name: Ascl2
Matrix ID: MA0816.1
Class: Basic helix-loop-helix factors (bHLH)
Family: MyoD / ASC-related factors
Collection: CORE
Taxon: Vertebrates
Species: Mus musculus
Data Type: HT-SELEX
Validation: 19443739
Uniprot ID: O35885  
Source: 23332764
Comment: Data is from Taipale HTSELEX DBD (2013)

Sequence logo

Frequency matrix

         
A [ 237 128 3 300 7 3 4 0 6 34 ]
C [ 36 41 300 0 23 300 0 1 206 101 ]
G [ 63 172 0 0 300 2 0 300 15 28 ]
T [ 16 1 1 15 18 1 300 2 94 199 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0816.1 MA0816 1 Ascl2 Mus musculus
MyoD / ASC-related factors Basic helix-loop-helix factors (bHLH)
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0440.1

ChIP-seq Centrality
log(P-value): -3423.88

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0440.1

ChIP-seq Centrality
log(P-value): -3416.25

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: