Detailed information of matrix profile MA0828.1

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Profile summary
Name: SREBF2(var.2)
Matrix ID: MA0828.1
Class: Basic helix-loop-helix factors (bHLH)
Family: bHLH-ZIP factors
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation: 11591434
Uniprot ID: Q12772  
Source: 23332764
Comment: Data is from Taipale HTSELEX DBD (2013)

Sequence logo

Frequency matrix

         
A [ 2898 385 7 3957 3 21 44 3 3957 20 ]
C [ 284 130 3957 2 3957 341 240 13 8 2114 ]
G [ 1059 16 16 75 82 3957 0 3957 39 104 ]
T [ 13 3957 1 12 11 0 3957 8 122 1843 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0828.1 MA0828 1 SREBF2(var.2) Homo sapiens
bHLH-ZIP factors Basic helix-loop-helix factors (bHLH)
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

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GC Content: