Detailed information of matrix profile MA0843.1

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Profile summary
Name: TEF
Matrix ID: MA0843.1
Class: TEA domain factors
Family: TEF-1-related factors
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation: 25215497
Uniprot ID: Q10587  
Source: 23332764
Comment: Data is from Taipale HTSELEX DBD (2013)

Sequence logo

Frequency matrix

         
A [ 541 1971 90 107 3601 17 1324 0 3601 3601 0 1383 ]
C [ 1053 372 18 0 0 3601 0 133 76 0 2120 1141 ]
G [ 853 1630 5 31 108 0 2277 43 11 19 269 554 ]
T [ 1154 8 3601 3601 0 446 0 3601 161 10 1481 522 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0843.1 MA0843 1 TEF Homo sapiens
TEF-1-related factors TEA domain factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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GC Content: