Detailed information of matrix profile MA0846.1

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Profile summary
Name: FOXC2
Matrix ID: MA0846.1
Class: Fork head / winged helix factors
Family: Forkhead box (FOX) factors
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation: 23354101
Uniprot ID: Q99958  
Source: 23332764
Comment: Data is from Taipale HTSELEX DBD (2013)

Sequence logo

Frequency matrix

         
A [ 8939 20456 11301 6418 2005 20456 20456 20456 31 20456 13296 10995 ]
C [ 1279 1652 3476 440 3773 6759 344 105 14435 101 2087 3080 ]
G [ 454 5093 3129 14038 321 87 81 279 68 328 1710 2649 ]
T [ 11517 2080 9155 136 20456 122 107 242 6021 215 7160 9461 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0846.1 MA0846 1 FOXC2 Homo sapiens
Forkhead box (FOX) factors Fork head / winged helix factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

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