Detailed information of matrix profile MA0911.1

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Profile summary
Name: Hoxa11
Matrix ID: MA0911.1
Class: Homeo domain factors
Family: HOX-related factors
Collection: CORE
Taxon: Vertebrates
Species: Mus musculus
Data Type: HT-SELEX
Validation: 18585359
Uniprot ID: P31270  
Source: 23332764
Comment: Data is from Taipale HTSELEX DBD (2013)

Sequence logo

Frequency matrix

         
A [ 178 296 1 30 250 14 489 704 704 704 179 139 ]
C [ 108 255 28 704 2 1 3 0 27 159 164 110 ]
G [ 307 704 16 0 704 3 13 2 3 117 150 112 ]
T [ 111 3 704 36 7 704 215 31 40 197 211 343 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0911.1 MA0911 1 Hoxa11 Mus musculus
HOX-related factors Homeo domain factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

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