Detailed information of matrix profile MA0974.1

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Profile summary
Name: CDF3
Matrix ID: MA0974.1
Class: C2H2 zinc finger factors
Family: Dof-type
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: PBM
Validation: 10758479
Uniprot ID: Q8LFV3  
Source: 25215497
Comment:

Sequence logo

Frequency matrix

         
A [ 447 607 994 989 880 19 70 222 286 ]
C [ 143 29 3 5 27 7 291 102 343 ]
G [ 220 65 1 0 83 969 160 495 169 ]
T [ 191 298 2 6 10 6 479 180 202 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0974.1 MA0974 1 CDF3 Arabidopsis thaliana
Dof-type C2H2 zinc finger factors
MA0974.2 MA0974 2 CDF3 Arabidopsis thaliana
Dof-type C2H2 zinc finger factors
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0317.1

ChIP-seq Centrality
log(P-value): -3376.93

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0317.1

ChIP-seq Centrality
log(P-value): -3088.23

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: