Detailed information of matrix profile MA0974.2

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Profile summary
Name: CDF3
Matrix ID: MA0974.2
Class: C2H2 zinc finger factors
Family: Dof-type
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 10758479
Uniprot ID: Q8LFV3  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 322 413 26 1047 2 10 9 5 140 136 350 382 ]
C [ 130 104 1038 37 1154 19 11 7 29 79 256 213 ]
G [ 186 210 7 44 0 3 4 2 24 63 214 166 ]
T [ 519 430 86 29 1 1125 1133 1143 964 879 337 396 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0974.1 MA0974 1 CDF3 Arabidopsis thaliana
Dof-type C2H2 zinc finger factors
MA0974.2 MA0974 2 CDF3 Arabidopsis thaliana
Dof-type C2H2 zinc finger factors
     

log(P-value) = -900.462

TFFM details

TFFM ID: TFFM0317.2

ChIP-seq Centrality
log(P-value): -586.493

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0317.2

ChIP-seq Centrality
log(P-value): -545.165

TFFM detailed summary logos

Description:

Alias:

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Consensus:

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GC Content: