Detailed information of matrix profile MA0990.1

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Profile summary
Name: EDT1
Matrix ID: MA0990.1
Class: Homeo domain factors
Family: HD-ZIP factors
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: PBM
Validation: 11247607
Uniprot ID: Q9FX31  
Source: 25215497
Comment:

Sequence logo

Frequency matrix

         
A [ 209 582 495 57 315 922 833 135 81 220 ]
C [ 392 256 27 11 55 28 39 26 25 504 ]
G [ 115 67 70 9 33 43 23 1 756 49 ]
T [ 285 94 409 923 598 7 105 839 137 227 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0990.1 MA0990 1 EDT1 Arabidopsis thaliana
HD-ZIP factors Homeo domain factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

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Consensus:

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GC Content: