Detailed information of matrix profile MA1024.1

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Profile summary
Name: HAT1
Matrix ID: MA1024.1
Class: Homeo domain factors
Family: HD-ZIP factors
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: PBM
Validation: 8253077
Uniprot ID: P46600  
Source: 25215497
Comment:

Sequence logo

Frequency matrix

         
A [ 149 69 1000 1000 0 0 1000 98 101 349 ]
C [ 374 506 0 0 0 1000 0 0 101 181 ]
G [ 328 69 0 0 0 0 0 0 286 289 ]
T [ 149 356 0 0 1000 0 0 902 512 181 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1024.1 MA1024 1 HAT1 Arabidopsis thaliana
HD-ZIP factors Homeo domain factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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