Detailed information of matrix profile MA1031.1

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Profile summary
Name: OJ1581_H09.2
Matrix ID: MA1031.1
Class: Basic helix-loop-helix factors (bHLH)
Family: TCP domain
Collection: CORE
Taxon: Plants
Species: Oryza sativa Japonica Group
Data Type: PBM
Validation: 21241251
Uniprot ID: Q6H878  
Source: 25215497
Comment:

Sequence logo

Frequency matrix

         
A [ 175 74 0 0 127 112 0 71 445 279 ]
C [ 131 146 0 0 101 661 1000 929 335 414 ]
G [ 414 335 929 1000 661 101 0 0 146 131 ]
T [ 279 445 71 0 112 127 0 0 74 175 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1031.1 MA1031 1 OJ1581_H09.2 Oryza sativa Japonica Group
TCP domain Basic helix-loop-helix factors (bHLH)
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

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GC Content: