Detailed information of matrix profile MA1097.1

  1. Home
  2. Matrix > MA1097.1

Profile summary
Name: ARALYDRAFT_493022
Matrix ID: MA1097.1
Class: Basic helix-loop-helix factors (bHLH)
Family: TCP domain
Collection: CORE
Taxon: Plants
Species: Arabidopsis lyrata subsp. lyrata
Data Type: PBM
Validation: 21241251
Uniprot ID: D7MCT1  
Source: 25215497
Comment:

Sequence logo

Frequency matrix

         
A [ 3 3 3 332 3 3 990 5 ]
C [ 3 3 332 661 990 990 3 985 ]
G [ 990 990 661 3 3 3 3 5 ]
T [ 3 3 3 3 3 3 3 5 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1097.1 MA1097 1 ARALYDRAFT_493022 Arabidopsis lyrata subsp. lyrata
TCP domain Basic helix-loop-helix factors (bHLH)
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: