Detailed information of matrix profile MA1689.1

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Profile summary
Name: ARF18
Matrix ID: MA1689.1
Class: B3 domain
Family:
Collection: CORE
Taxon: Plants
Species: Zea mays
Data Type: DAP-seq
Validation: 24485461
Uniprot ID: A0A060CYJ7  
Source: 30375394
Comment: The motif matches the TGTC core motif associated to ARF TFs.

Sequence logo

Frequency matrix

         
A [ 985 700 77 346 60 2735 9 2672 2292 2075 889 998 729 ]
C [ 580 897 2334 2297 16 13 2746 108 154 277 665 533 603 ]
G [ 588 751 50 91 2698 39 25 12 209 321 746 549 632 ]
T [ 644 449 336 63 23 10 17 5 142 124 497 717 833 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1689.1 MA1689 1 ARF18 Zea mays
B3 domain
     

log(P-value) = -5397.21

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