Detailed information of matrix profile MA1697.1

  1. Home
  2. Matrix > MA1697.1

Profile summary
Name: ARF4
Matrix ID: MA1697.1
Class: B3 domain
Family:
Collection: CORE
Taxon: Plants
Species: Zea mays
Data Type: DAP-seq
Validation: 24485461
Uniprot ID: D9HNT1  
Source: 30375394
Comment: The motif matches the TGTC core motif associated to ARF TFs.

Sequence logo

Frequency matrix

         
A [ 2014 1712 5236 375 335 6453 35 6158 5261 316 1927 1751 ]
C [ 1950 2246 734 5738 143 57 6524 155 667 516 1481 1750 ]
G [ 1732 1795 356 334 6073 112 74 271 243 5584 1918 1555 ]
T [ 970 913 340 219 115 44 33 82 495 250 1340 1610 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1697.1 MA1697 1 ARF4 Zea mays
B3 domain
     

log(P-value) = -3121.59

TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: