JASPAR RESTful API

This API provides an easy-to-use REST web interface to query/retrieve matrix profile data from the latest version of the JASPAR database. The API comes with a human browsable interface and also a programmatic interface which return the results in eight different formats, including json, jsonp, jaspar, meme, transfac, pfm, yaml and bed.

GET /api/v1/matrix/MA0947.1/

HTTP 200 OK
Allow: GET, HEAD, OPTIONS
Content-Type: application/json
Vary: Accept

{
    "source": "24477691",
    "matrix_id": "MA0947.1",
    "tfe_ids": [],
    "pazar_tf_id": [],
    "sites_url": null,
    "type": "PBM",
    "tffm": {
        "tffm_id": "TFFM0439.1",
        "version": 1,
        "log_p_1st_order": -1325.26,
        "tffm_url": "https://jaspar2020.genereg.net/api/v1/tffm/TFFM0439.1/",
        "experiment_name": "ReMap2020_ARR14",
        "base_id": "TFFM0439",
        "log_p_detailed": -619.099
    },
    "tax_group": "plants",
    "medline": [
        "25215497"
    ],
    "uniprot_ids": [
        "Q8L9Y3"
    ],
    "species": [
        {
            "tax_id": 3702,
            "name": "Arabidopsis thaliana"
        }
    ],
    "pfm": {
        "C": [
            5.0,
            1.0,
            1.0,
            3.0,
            154.0,
            960.0,
            5.0,
            484.0
        ],
        "G": [
            26.0,
            984.0,
            3.0,
            2.0,
            1.0,
            1.0,
            960.0,
            401.0
        ],
        "T": [
            24.0,
            13.0,
            5.0,
            993.0,
            339.0,
            38.0,
            26.0,
            32.0
        ],
        "A": [
            945.0,
            2.0,
            991.0,
            2.0,
            506.0,
            1.0,
            10.0,
            83.0
        ]
    },
    "version": 1,
    "collection": "CORE",
    "family": [
        "Myb/SANT domain factors"
    ],
    "pubmed_ids": [
        "25215497"
    ],
    "pazar_tf_ids": [],
    "name": "ARR14",
    "tfe_id": [],
    "class": [
        "Tryptophan cluster factors"
    ],
    "versions_url": "https://jaspar2020.genereg.net/api/v1/matrix/MA0947/versions",
    "base_id": "MA0947",
    "sequence_logo": "https://jaspar2020.genereg.net/static/logos/svg/MA0947.1.svg"
}

Matrix Details