JASPAR RESTful API

This API provides an easy-to-use REST web interface to query/retrieve matrix profile data from the latest version of the JASPAR database. The API comes with a human browsable interface and also a programmatic interface which return the results in eight different formats, including json, jsonp, jaspar, meme, transfac, pfm, yaml and bed.

GET /api/v1/matrix/MA1199.1/

HTTP 200 OK
Allow: GET, HEAD, OPTIONS
Content-Type: application/json
Vary: Accept

{
    "uniprot_ids": [
        "A2RVQ5"
    ],
    "type": "DAP-seq",
    "name": "AGL16",
    "collection": "CORE",
    "sequence_logo": "https://jaspar2020.genereg.net/static/logos/svg/MA1199.1.svg",
    "tfe_ids": [],
    "versions_url": "https://jaspar2020.genereg.net/api/v1/matrix/MA1199/versions",
    "family": [],
    "species": [
        {
            "name": "Arabidopsis thaliana",
            "tax_id": 3702
        }
    ],
    "matrix_id": "MA1199.1",
    "version": 1,
    "pfm": {
        "T": [
            360.0,
            404.0,
            279.0,
            0.0,
            61.0,
            189.0,
            235.0,
            287.0,
            410.0,
            292.0,
            139.0,
            0.0,
            25.0,
            152.0,
            37.0
        ],
        "A": [
            35.0,
            11.0,
            100.0,
            0.0,
            0.0,
            123.0,
            66.0,
            131.0,
            0.0,
            44.0,
            109.0,
            62.0,
            0.0,
            210.0,
            358.0
        ],
        "G": [
            4.0,
            3.0,
            28.0,
            0.0,
            0.0,
            23.0,
            40.0,
            0.0,
            4.0,
            23.0,
            135.0,
            356.0,
            393.0,
            12.0,
            8.0
        ],
        "C": [
            19.0,
            0.0,
            11.0,
            418.0,
            357.0,
            83.0,
            77.0,
            0.0,
            4.0,
            59.0,
            35.0,
            0.0,
            0.0,
            44.0,
            15.0
        ]
    },
    "tffm": null,
    "class": [
        "MADS box factors"
    ],
    "tax_group": "plants",
    "pazar_tf_id": [],
    "pubmed_ids": [
        "12743119"
    ],
    "tfe_id": [],
    "medline": [
        "12743119"
    ],
    "source": "27203113",
    "pazar_tf_ids": [],
    "base_id": "MA1199",
    "sites_url": null
}

Matrix Details