Matrix Details
This API provides an easy-to-use REST web interface to query/retrieve matrix
profile data from the latest version of the JASPAR database. The API comes
with a human browsable interface and also a programmatic interface which
return the results in eight different formats, including
json
,
jsonp
, jaspar
, meme
,
transfac
, pfm
, yaml
and
bed
.
GET /api/v1/matrix/PB0108.1/
{ "matrix_id": "PB0108.1", "tfe_ids": [], "pazar_tf_id": [], "sites_url": null, "type": "universal protein binding microarray (PBM)", "tffm": null, "tax_group": "vertebrates", "medline": [ "19443739" ], "uniprot_ids": [ "P81269" ], "species": [ { "tax_id": 10090, "name": "Mus musculus" } ], "pfm": { "C": [ 21.0, 11.0, 11.0, 5.0, 5.0, 4.0, 86.0, 3.0, 23.0, 2.0, 26.0, 7.0, 11.0, 30.0 ], "G": [ 42.0, 29.0, 20.0, 5.0, 81.0, 7.0, 5.0, 78.0, 8.0, 35.0, 21.0, 10.0, 18.0, 20.0 ], "T": [ 18.0, 28.0, 4.0, 86.0, 6.0, 7.0, 5.0, 3.0, 12.0, 23.0, 51.0, 14.0, 26.0, 24.0 ], "A": [ 19.0, 32.0, 65.0, 4.0, 8.0, 83.0, 4.0, 16.0, 56.0, 40.0, 2.0, 69.0, 46.0, 26.0 ] }, "version": 1, "collection": "PBM", "family": [ "Leucine Zipper" ], "pubmed_ids": [ "19443739" ], "pazar_tf_ids": [], "name": "Atf1_2", "tfe_id": [], "class": [ "Zipper-Type" ], "versions_url": "https://jaspar2020.genereg.net/api/v1/matrix/PB0108/versions", "base_id": "PB0108", "sequence_logo": "https://jaspar2020.genereg.net/static/logos/svg/PB0108.1.svg" }