JASPAR RESTful API

This API provides an easy-to-use REST web interface to query/retrieve matrix profile data from the latest version of the JASPAR database. The API comes with a human browsable interface and also a programmatic interface which return the results in eight different formats, including json, jsonp, jaspar, meme, transfac, pfm, yaml and bed.

GET /api/v1/matrix/UN0044.1/

HTTP 200 OK
Allow: GET, HEAD, OPTIONS
Content-Type: application/json
Vary: Accept

{
    "sites_url": null,
    "pfm": {
        "A": [
            29.0,
            0.0,
            382.0,
            0.0,
            0.0,
            999.0,
            615.0,
            77.0
        ],
        "C": [
            734.0,
            956.0,
            616.0,
            999.0,
            0.0,
            0.0,
            0.0,
            230.0
        ],
        "T": [
            117.0,
            42.0,
            0.0,
            0.0,
            999.0,
            0.0,
            333.0,
            576.0
        ],
        "G": [
            117.0,
            0.0,
            0.0,
            0.0,
            0.0,
            0.0,
            51.0,
            115.0
        ]
    },
    "species": [
        {
            "tax_id": 3483,
            "name": "Cannabis sativa"
        }
    ],
    "matrix_id": "UN0044.1",
    "name": "PK19166.1",
    "medline": [],
    "tfe_ids": [],
    "pazar_tf_ids": [],
    "type": "PBM",
    "version": 1,
    "tfe_id": [],
    "base_id": "UN0044",
    "uniprot_ids": [],
    "source": "31133749",
    "pubmed_ids": [],
    "sequence_logo": "https://jaspar2020.genereg.net/static/logos/svg/UN0044.1.svg",
    "family": [],
    "comment": "not supported by literature",
    "collection": "UNVALIDATED",
    "tffm": null,
    "versions_url": "https://jaspar2020.genereg.net/api/v1/matrix/UN0044/versions",
    "tax_group": "plants",
    "class": [],
    "pazar_tf_id": []
}

Matrix Details