Matrix Details
This API provides an easy-to-use REST web interface to query/retrieve matrix
profile data from the latest version of the JASPAR database. The API comes
with a human browsable interface and also a programmatic interface which
return the results in eight different formats, including
json
,
jsonp
, jaspar
, meme
,
transfac
, pfm
, yaml
and
bed
.
GET /api/v1/matrix/MA0276.1/
{ "tffm": null, "version": 1, "medline": [ "16522208" ], "pazar_tf_id": [], "pfm": { "G": [ 8.0, 0.0, 133.0, 101.0, 54.0, 8.0, 8.0, 92.0, 249.0, 256.0 ], "A": [ 0.0, 0.0, 61.0, 58.0, 130.0, 0.0, 33.0, 80.0, 0.0, 0.0 ], "C": [ 220.0, 291.0, 21.0, 54.0, 0.0, 11.0, 150.0, 0.0, 8.0, 0.0 ], "T": [ 35.0, 3.0, 10.0, 12.0, 0.0, 147.0, 35.0, 26.0, 19.0, 18.0 ] }, "name": "ASH1", "base_id": "MA0276", "matrix_id": "MA0276.1", "pubmed_ids": [ "16522208" ], "class": [ "Other C4 zinc finger-type factors" ], "family": [ "GATA-type zinc fingers" ], "sequence_logo": "https://jaspar2020.genereg.net/static/logos/svg/MA0276.1.svg", "sites_url": null, "pazar_tf_ids": [], "collection": "CORE", "tax_group": "fungi", "type": "ChIP-chip", "species": [ { "tax_id": 4932, "name": "Saccharomyces cerevisiae" } ], "uniprot_ids": [ "P34233" ], "tfe_id": [], "versions_url": "https://jaspar2020.genereg.net/api/v1/matrix/MA0276/versions", "tfe_ids": [] }