JASPAR RESTful API

This API provides an easy-to-use REST web interface to query/retrieve matrix profile data from the latest version of the JASPAR database. The API comes with a human browsable interface and also a programmatic interface which return the results in eight different formats, including json, jsonp, jaspar, meme, transfac, pfm, yaml and bed.

GET /api/v1/matrix/MA0276.1/?format=api

HTTP 200 OK
Allow: GET, HEAD, OPTIONS
Content-Type: application/json
Vary: Accept

{
    "pfm": {
        "G": [
            8.0,
            0.0,
            133.0,
            101.0,
            54.0,
            8.0,
            8.0,
            92.0,
            249.0,
            256.0
        ],
        "A": [
            0.0,
            0.0,
            61.0,
            58.0,
            130.0,
            0.0,
            33.0,
            80.0,
            0.0,
            0.0
        ],
        "T": [
            35.0,
            3.0,
            10.0,
            12.0,
            0.0,
            147.0,
            35.0,
            26.0,
            19.0,
            18.0
        ],
        "C": [
            220.0,
            291.0,
            21.0,
            54.0,
            0.0,
            11.0,
            150.0,
            0.0,
            8.0,
            0.0
        ]
    },
    "uniprot_ids": [
        "P34233"
    ],
    "sites_url": null,
    "class": [
        "Other C4 zinc finger-type factors"
    ],
    "collection": "CORE",
    "name": "ASH1",
    "medline": [
        "16522208"
    ],
    "version": 1,
    "tax_group": "fungi",
    "tfe_ids": [],
    "tffm": null,
    "pazar_tf_id": [],
    "pubmed_ids": [
        "16522208"
    ],
    "type": "ChIP-chip",
    "matrix_id": "MA0276.1",
    "pazar_tf_ids": [],
    "family": [
        "GATA-type zinc fingers"
    ],
    "tfe_id": [],
    "species": [
        {
            "name": "Saccharomyces cerevisiae",
            "tax_id": 4932
        }
    ],
    "versions_url": "https://jaspar2020.genereg.net/api/v1/matrix/MA0276/versions",
    "base_id": "MA0276",
    "sequence_logo": "https://jaspar2020.genereg.net/static/logos/svg/MA0276.1.svg"
}

Matrix Details