JASPAR RESTful API

This API provides an easy-to-use REST web interface to query/retrieve matrix profile data from the latest version of the JASPAR database. The API comes with a human browsable interface and also a programmatic interface which return the results in eight different formats, including json, jsonp, jaspar, meme, transfac, pfm, yaml and bed.

GET /api/v1/matrix/MA0956.1/?format=api

HTTP 200 OK
Allow: GET, HEAD, OPTIONS
Content-Type: application/json
Vary: Accept

{
    "pfm": {
        "G": [
            236.0,
            342.0,
            38.0,
            33.0,
            0.0,
            820.0,
            0.0,
            722.0,
            229.0,
            253.0
        ],
        "A": [
            256.0,
            211.0,
            136.0,
            893.0,
            23.0,
            157.0,
            74.0,
            104.0,
            218.0,
            255.0
        ],
        "T": [
            255.0,
            218.0,
            104.0,
            74.0,
            157.0,
            23.0,
            893.0,
            136.0,
            211.0,
            256.0
        ],
        "C": [
            253.0,
            229.0,
            722.0,
            0.0,
            820.0,
            0.0,
            33.0,
            38.0,
            342.0,
            236.0
        ]
    },
    "uniprot_ids": [
        "Q93VJ4"
    ],
    "sites_url": null,
    "class": [
        "Basic helix-loop-helix factors (bHLH)"
    ],
    "species": [
        {
            "name": "Arabidopsis thaliana",
            "tax_id": 3702
        }
    ],
    "collection": "CORE",
    "name": "BEE2",
    "medline": [
        "12897250"
    ],
    "version": 1,
    "tax_group": "plants",
    "tfe_ids": [],
    "tffm": null,
    "pazar_tf_id": [],
    "pubmed_ids": [
        "12897250"
    ],
    "type": "PBM",
    "matrix_id": "MA0956.1",
    "pazar_tf_ids": [],
    "family": [],
    "tfe_id": [],
    "source": "25215497",
    "versions_url": "https://jaspar2020.genereg.net/api/v1/matrix/MA0956/versions",
    "base_id": "MA0956",
    "sequence_logo": "https://jaspar2020.genereg.net/static/logos/svg/MA0956.1.svg"
}

Matrix Details