JASPAR RESTful API

This API provides an easy-to-use REST web interface to query/retrieve matrix profile data from the latest version of the JASPAR database. The API comes with a human browsable interface and also a programmatic interface which return the results in eight different formats, including json, jsonp, jaspar, meme, transfac, pfm, yaml and bed.

GET /api/v1/matrix/MA1451.1/?format=api

HTTP 200 OK
Allow: GET, HEAD, OPTIONS
Content-Type: application/json
Vary: Accept

{
    "pubmed_ids": [
        "20506374"
    ],
    "pazar_tf_id": [],
    "tffm": null,
    "collection": "CORE",
    "name": "nhr-6",
    "source": "31133749",
    "tfe_id": [],
    "versions_url": "https://jaspar2020.genereg.net/api/v1/matrix/MA1451/versions",
    "tfe_ids": [],
    "sequence_logo": "https://jaspar2020.genereg.net/static/logos/svg/MA1451.1.svg",
    "base_id": "MA1451",
    "matrix_id": "MA1451.1",
    "sites_url": null,
    "pazar_tf_ids": [],
    "pfm": {
        "C": [
            3.0,
            3.0,
            3.0,
            3.0,
            3.0,
            3.0,
            990.0,
            4.0
        ],
        "T": [
            3.0,
            3.0,
            3.0,
            332.0,
            3.0,
            990.0,
            3.0,
            4.0
        ],
        "A": [
            990.0,
            990.0,
            990.0,
            3.0,
            3.0,
            3.0,
            3.0,
            985.0
        ],
        "G": [
            3.0,
            3.0,
            3.0,
            661.0,
            990.0,
            3.0,
            3.0,
            4.0
        ]
    },
    "species": [
        {
            "name": "Caenorhabditis elegans",
            "tax_id": 6239
        }
    ],
    "version": 1,
    "medline": [
        "20506374"
    ],
    "uniprot_ids": [
        "P41829"
    ],
    "tax_group": "nematodes",
    "class": [
        "Nuclear receptors with C4 zinc fingers"
    ],
    "type": "PBM",
    "family": []
}

Matrix Details