JASPAR RESTful API

This API provides an easy-to-use REST web interface to query/retrieve matrix profile data from the latest version of the JASPAR database. The API comes with a human browsable interface and also a programmatic interface which return the results in eight different formats, including json, jsonp, jaspar, meme, transfac, pfm, yaml and bed.

GET /api/v1/matrix/MA1558.1/?format=api

HTTP 200 OK
Allow: GET, HEAD, OPTIONS
Content-Type: application/json
Vary: Accept

{
    "sites_url": null,
    "source": "28473536",
    "class": [
        "C2H2 zinc finger factors"
    ],
    "uniprot_ids": [
        "O95863"
    ],
    "species": [
        {
            "name": "Homo sapiens",
            "tax_id": 9606
        }
    ],
    "pfm": {
        "T": [
            5112.0,
            3518.0,
            340.0,
            568.0,
            306.0,
            28.0,
            19982.0,
            311.0,
            9044.0,
            6356.0
        ],
        "C": [
            3187.0,
            501.0,
            19982.0,
            297.0,
            517.0,
            5.0,
            0.0,
            0.0,
            10938.0,
            4592.0
        ],
        "A": [
            5274.0,
            6993.0,
            446.0,
            19982.0,
            1766.0,
            72.0,
            38.0,
            706.0,
            1639.0,
            10088.0
        ],
        "G": [
            6410.0,
            12989.0,
            275.0,
            91.0,
            19982.0,
            19982.0,
            42.0,
            19982.0,
            5306.0,
            9894.0
        ]
    },
    "tfe_ids": [],
    "pazar_tf_ids": [],
    "versions_url": "https://jaspar2020.genereg.net/api/v1/matrix/MA1558/versions",
    "tax_group": "vertebrates",
    "pazar_tf_id": [],
    "tffm": null,
    "matrix_id": "MA1558.1",
    "family": [
        "More than 3 adjacent zinc finger factors"
    ],
    "pubmed_ids": [
        "26170144"
    ],
    "name": "SNAI1",
    "type": "HT-SELEX",
    "collection": "CORE",
    "sequence_logo": "https://jaspar2020.genereg.net/static/logos/svg/MA1558.1.svg",
    "base_id": "MA1558",
    "medline": [
        "26170144"
    ],
    "tfe_id": [],
    "version": 1
}

Matrix Details