JASPAR RESTful API

This API provides an easy-to-use REST web interface to query/retrieve matrix profile data from the latest version of the JASPAR database. The API comes with a human browsable interface and also a programmatic interface which return the results in eight different formats, including json, jsonp, jaspar, meme, transfac, pfm, yaml and bed.

GET /api/v1/matrix/MA1564.1/?format=api

HTTP 200 OK
Allow: GET, HEAD, OPTIONS
Content-Type: application/json
Vary: Accept

{
    "matrix_id": "MA1564.1",
    "species": [
        {
            "tax_id": 9606,
            "name": "Homo sapiens"
        }
    ],
    "tax_group": "vertebrates",
    "pfm": {
        "C": [
            440.0,
            2451.0,
            2451.0,
            1127.0,
            2451.0,
            200.0,
            2451.0,
            2451.0,
            2451.0,
            1259.0,
            1863.0,
            1167.0
        ],
        "T": [
            226.0,
            518.0,
            284.0,
            96.0,
            9.0,
            173.0,
            14.0,
            30.0,
            412.0,
            353.0,
            588.0,
            660.0
        ],
        "A": [
            834.0,
            566.0,
            321.0,
            2451.0,
            2.0,
            211.0,
            22.0,
            0.0,
            39.0,
            1192.0,
            188.0,
            420.0
        ],
        "G": [
            952.0,
            309.0,
            113.0,
            56.0,
            17.0,
            2451.0,
            0.0,
            0.0,
            24.0,
            38.0,
            191.0,
            204.0
        ]
    },
    "pubmed_ids": [
        "26187067"
    ],
    "source": "28473536",
    "tfe_id": [],
    "pazar_tf_ids": [],
    "uniprot_ids": [
        "P0CG40"
    ],
    "tffm": null,
    "base_id": "MA1564",
    "sequence_logo": "https://jaspar2020.genereg.net/static/logos/svg/MA1564.1.svg",
    "version": 1,
    "collection": "CORE",
    "class": [
        "C2H2 zinc finger factors"
    ],
    "medline": [
        "26187067"
    ],
    "type": "HT-SELEX",
    "family": [
        "Three-zinc finger Kruppel-related factors"
    ],
    "name": "SP9",
    "tfe_ids": [],
    "pazar_tf_id": [],
    "sites_url": null,
    "versions_url": "https://jaspar2020.genereg.net/api/v1/matrix/MA1564/versions"
}

Matrix Details