JASPAR RESTful API

This API provides an easy-to-use REST web interface to query/retrieve matrix profile data from the latest version of the JASPAR database. The API comes with a human browsable interface and also a programmatic interface which return the results in eight different formats, including json, jsonp, jaspar, meme, transfac, pfm, yaml and bed.

GET /api/v1/matrix/PH0011.1/?format=api

HTTP 200 OK
Allow: GET, HEAD, OPTIONS
Content-Type: application/json
Vary: Accept

{
    "class": [
        "Helix-Turn-Helix"
    ],
    "pazar_tf_ids": [],
    "type": "universal protein binding microarray (PBM)",
    "medline": [
        "18585359"
    ],
    "name": "Alx1_2",
    "versions_url": "https://jaspar2020.genereg.net/api/v1/matrix/PH0011/versions",
    "tfe_id": [],
    "matrix_id": "PH0011.1",
    "species": [
        {
            "name": "Mus musculus",
            "tax_id": 10090
        }
    ],
    "tax_group": "vertebrates",
    "uniprot_ids": [
        "Q8C8B0"
    ],
    "collection": "PBM_HOMEO",
    "version": 1,
    "sequence_logo": "https://jaspar2020.genereg.net/static/logos/svg/PH0011.1.svg",
    "tffm": null,
    "family": [
        "Homeo"
    ],
    "pfm": {
        "T": [
            22.0,
            10.0,
            14.0,
            21.0,
            74.0,
            95.0,
            0.0,
            1.0,
            98.0,
            98.0,
            1.0,
            2.0,
            43.0,
            40.0,
            23.0,
            25.0,
            18.0
        ],
        "A": [
            17.0,
            33.0,
            29.0,
            32.0,
            2.0,
            1.0,
            98.0,
            98.0,
            1.0,
            0.0,
            95.0,
            74.0,
            16.0,
            17.0,
            24.0,
            26.0,
            27.0
        ],
        "C": [
            41.0,
            21.0,
            46.0,
            20.0,
            24.0,
            4.0,
            0.0,
            0.0,
            1.0,
            1.0,
            0.0,
            1.0,
            22.0,
            23.0,
            20.0,
            21.0,
            34.0
        ],
        "G": [
            20.0,
            35.0,
            10.0,
            26.0,
            1.0,
            0.0,
            1.0,
            1.0,
            0.0,
            0.0,
            4.0,
            24.0,
            20.0,
            19.0,
            32.0,
            29.0,
            21.0
        ]
    },
    "pazar_tf_id": [],
    "base_id": "PH0011",
    "sites_url": null,
    "tfe_ids": [],
    "pubmed_ids": [
        "18585359"
    ]
}

Matrix Details