JASPAR CORE

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Total 1964 profiles

Display profiles
ID Name Species Class Family Sequence logo
MA1099.2 HES1 Homo sapiens Basic helix-loop-helix factors (bHLH) Hairy-related factors
MA1100.1 ASCL1 Homo sapiens Basic helix-loop-helix factors (bHLH) MyoD / ASC-related factors
MA1100.2 ASCL1 Homo sapiens Basic helix-loop-helix factors (bHLH) MyoD / ASC-related factors
MA1101.1 BACH2 Homo sapiens Basic leucine zipper factors (bZIP) Jun-related factors
MA1101.2 BACH2 Homo sapiens Basic leucine zipper factors (bZIP) Jun-related factors
MA1102.1 CTCFL Homo sapiens C2H2 zinc finger factors More than 3 adjacent zinc finger factors
MA1102.2 CTCFL Homo sapiens C2H2 zinc finger factors More than 3 adjacent zinc finger factors
MA1103.1 FOXK2 Homo sapiens Fork head / winged helix factors Forkhead box (FOX) factors
MA1103.2 FOXK2 Homo sapiens Fork head / winged helix factors Forkhead box (FOX) factors
MA1104.1 GATA6 Homo sapiens Other C4 zinc finger-type factors GATA-type zinc fingers
Showing 10 profiles of page 138 from 197 pages

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Scan

Input a (FASTA-formatted) sequence to scan with selected matrix models.

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Relative profile score threshold %

Cluster

Cluster selected models using STAMP tool.



You can use the Newick tree from results to visualize on PhyloTree

Randomize

Create random matrix models based on selected models.

Permute

Create models with permuted columns from selected models.

Download

Download the PFMs of the model(s) selected in four different formats.