JASPAR CORE

  1. Home
  2. Collection core

Total 1964 profiles

Display profiles
ID Name Species Class Family Sequence logo
MA1522.1 MAZ Homo sapiens C2H2 zinc finger factors More than 3 adjacent zinc finger factors
MA1523.1 MSANTD3 Homo sapiens Tryptophan cluster factors Myb/SANT domain factors
MA1524.1 MSGN1 Homo sapiens Basic helix-loop-helix factors (bHLH) Tal-related factors
MA1525.1 NFATC4 Homo sapiens Rel homology region (RHR) factors NFAT-related factors
MA1527.1 NFIC(var.2) Homo sapiens SMAD/NF-1 DNA-binding domain factors Nuclear factor 1
MA1528.1 NFIX(var.2) Homo sapiens SMAD/NF-1 DNA-binding domain factors Nuclear factor 1
MA1529.1 NHLH2 Homo sapiens Basic helix-loop-helix factors (bHLH) Tal-related factors
MA1530.1 NKX6-3 Homo sapiens Homeo domain factors NK-related factors
MA1531.1 NR1D1 Homo sapiens Nuclear receptors with C4 zinc fingers Thyroid hormone receptor-related factors (NR1)
MA1532.1 NR1D2 Homo sapiens Nuclear receptors with C4 zinc fingers Thyroid hormone receptor-related factors (NR1)
Showing 10 profiles of page 181 from 197 pages

Analyze selected profiles

Please select matrix profiles on the left side to add to your cart or perform the following analysis.

Add to cart

You have 0 profile(s) in your cart. You can add profiles to the cart to download or perform analysis.
View cart

Scan

Input a (FASTA-formatted) sequence to scan with selected matrix models.

(3000 nucleotides left)
Relative profile score threshold %

Cluster

Cluster selected models using STAMP tool.



You can use the Newick tree from results to visualize on PhyloTree

Randomize

Create random matrix models based on selected models.

Permute

Create models with permuted columns from selected models.

Download

Download the PFMs of the model(s) selected in four different formats.