JASPAR CORE

Total 1964 profiles

Display profiles
ID Name Species Class Family Sequence logo
MA1555.1 RXRB(var.2) Homo sapiens Nuclear receptors with C4 zinc fingers RXR-related receptors (NR2)
MA1556.1 RXRG(var.2) Homo sapiens Nuclear receptors with C4 zinc fingers RXR-related receptors (NR2)
MA1557.1 SMAD5 Homo sapiens SMAD/NF-1 DNA-binding domain factors SMAD factors
MA1558.1 SNAI1 Homo sapiens C2H2 zinc finger factors More than 3 adjacent zinc finger factors
MA1559.1 SNAI3 Homo sapiens C2H2 zinc finger factors More than 3 adjacent zinc finger factors
MA1560.1 SOHLH2 Homo sapiens Basic helix-loop-helix factors (bHLH) PAS domain factors
MA1561.1 SOX12 Homo sapiens High-mobility group (HMG) domain factors SOX-related factors
MA1562.1 SOX14 Homo sapiens High-mobility group (HMG) domain factors SOX-related factors
MA1563.1 SOX18 Homo sapiens High-mobility group (HMG) domain factors SOX-related factors
MA1564.1 SP9 Homo sapiens C2H2 zinc finger factors Three-zinc finger Kruppel-related factors
Showing 10 profiles of page 184 from 197 pages

Analyze selected profiles

Please select matrix profiles on the left side to add to your cart or perform the following analysis.


You have 0 profile(s) in your cart. You can add profiles to the cart to download or perform analysis.

Input a (FASTA-formatted) sequence to scan with selected matrix models.

(3000 nucleotides left)

Relative profile score threshold %

Cluster selected models using STAMP tool.




You can use the Newick tree from results to visualize on PhyloTree

Create random matrix models based on selected models.


Create models with permuted columns from selected models.


Download the PFMs of the model(s) selected in four different formats.