JASPAR CORE

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Total 1964 profiles

Display profiles
ID Name Species Class Family Sequence logo
MA1587.1 ZNF135 Homo sapiens C2H2 zinc finger factors More than 3 adjacent zinc finger factors
MA1588.1 ZNF136 Homo sapiens C2H2 zinc finger factors More than 3 adjacent zinc finger factors
MA1589.1 ZNF140 Homo sapiens C2H2 zinc finger factors More than 3 adjacent zinc finger factors
MA1592.1 ZNF274 Homo sapiens C2H2 zinc finger factors More than 3 adjacent zinc finger factors
MA1593.1 ZNF317 Homo sapiens C2H2 zinc finger factors More than 3 adjacent zinc finger factors
MA1594.1 ZNF382 Homo sapiens C2H2 zinc finger factors Factors with multiple dispersed zinc fingers
MA1596.1 ZNF460 Homo sapiens C2H2 zinc finger factors More than 3 adjacent zinc finger factors
MA1597.1 ZNF528 Homo sapiens C2H2 zinc finger factors More than 3 adjacent zinc finger factors
MA1599.1 ZNF682 Homo sapiens C2H2 zinc finger factors More than 3 adjacent zinc finger factors
MA1600.1 ZNF684 Homo sapiens C2H2 zinc finger factors More than 3 adjacent zinc finger factors
Showing 10 profiles of page 187 from 197 pages

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Scan

Input a (FASTA-formatted) sequence to scan with selected matrix models.

(3000 nucleotides left)
Relative profile score threshold %

Cluster

Cluster selected models using STAMP tool.



You can use the Newick tree from results to visualize on PhyloTree

Randomize

Create random matrix models based on selected models.

Permute

Create models with permuted columns from selected models.

Download

Download the PFMs of the model(s) selected in four different formats.