JASPAR CORE

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Total 1964 profiles

Display profiles
ID Name Species Class Family Sequence logo
MA0286.1 CST6 Saccharomyces cerevisiae Basic leucine zipper factors (bZIP)
MA0287.1 CUP2 Saccharomyces cerevisiae Copper-fist DNA-binding domain
MA0288.1 CUP9 Saccharomyces cerevisiae Homeo domain factors TALE-type homeo domain factors
MA0289.1 DAL80 Saccharomyces cerevisiae Other C4 zinc finger-type factors GATA-type zinc fingers
MA0290.1 DAL81 Saccharomyces cerevisiae C6 zinc cluster factors
MA0291.1 DAL82 Saccharomyces cerevisiae
MA0292.1 ECM22 Saccharomyces cerevisiae C6 zinc cluster factors
MA0293.1 ECM23 Saccharomyces cerevisiae Other C4 zinc finger-type factors GATA-type zinc fingers
MA0294.1 EDS1 Saccharomyces cerevisiae C6 zinc cluster factors
MA0295.1 FHL1 Saccharomyces cerevisiae Fork head / winged helix factors Forkhead box (FOX) factors
Showing 10 profiles of page 44 from 197 pages

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Scan

Input a (FASTA-formatted) sequence to scan with selected matrix models.

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Relative profile score threshold %

Cluster

Cluster selected models using STAMP tool.



You can use the Newick tree from results to visualize on PhyloTree

Randomize

Create random matrix models based on selected models.

Permute

Create models with permuted columns from selected models.

Download

Download the PFMs of the model(s) selected in four different formats.