JASPAR CORE

Total 1964 profiles

Display profiles
ID Name Species Class Family Sequence logo
MA0965.1 BIM2 Arabidopsis thaliana Basic helix-loop-helix factors (bHLH)
MA0966.1 BIM3 Arabidopsis thaliana Basic helix-loop-helix factors (bHLH)
MA0967.1 BZIP60 Arabidopsis thaliana Basic leucine zipper factors (bZIP)
MA0968.1 bZIP68 Arabidopsis thaliana Basic leucine zipper factors (bZIP)
MA0968.2 bZIP68 Arabidopsis thaliana Basic leucine zipper factors (bZIP)
MA0969.1 CMTA2 Arabidopsis thaliana CG-1 domain
MA0970.1 CMTA3 Arabidopsis thaliana CG-1 domain
MA0971.1 DREB1A Arabidopsis thaliana AP2/ERF domain
MA0972.1 CCA1 Arabidopsis thaliana Tryptophan cluster factors Myb/SANT domain factors
MA0973.1 CDF2 Arabidopsis thaliana C2H2 zinc finger factors Dof-type
MA0974.1 CDF3 Arabidopsis thaliana C2H2 zinc finger factors Dof-type
MA0974.2 CDF3 Arabidopsis thaliana C2H2 zinc finger factors Dof-type
MA0975.1 CRF2 Arabidopsis thaliana AP2/ERF domain
MA0976.1 CRF4 Arabidopsis thaliana AP2/ERF domain
MA0976.2 CRF4 Arabidopsis thaliana AP2/ERF domain
MA0977.1 DOF2.5 Arabidopsis thaliana C2H2 zinc finger factors Dof-type
MA0978.1 DREB1E Arabidopsis thaliana AP2/ERF domain
MA0979.1 ERF008 Arabidopsis thaliana AP2/ERF domain
MA0980.1 RAP2-10 Arabidopsis thaliana AP2/ERF domain
MA0980.2 RAP2-10 Arabidopsis thaliana AP2/ERF domain
MA0981.1 DOF1.8 Arabidopsis thaliana C2H2 zinc finger factors Dof-type
MA0982.1 DOF2.4 Arabidopsis thaliana C2H2 zinc finger factors Dof-type
MA0983.1 DOF5.6 Arabidopsis thaliana C2H2 zinc finger factors Dof-type
MA0984.1 DOF5.7 Arabidopsis thaliana C2H2 zinc finger factors Dof-type
MA0985.1 DRE1C Arabidopsis thaliana Beta-Hairpin-Ribbon AP2 MBD_like
Showing 25 profiles of page 50 from 79 pages

Analyze selected profiles

Please select matrix profiles on the left side to add to your cart or perform the following analysis.


You have 0 profile(s) in your cart. You can add profiles to the cart to download or perform analysis.

Input a (FASTA-formatted) sequence to scan with selected matrix models.

(3000 nucleotides left)

Relative profile score threshold %

Cluster selected models using STAMP tool.




You can use the Newick tree from results to visualize on PhyloTree

Create random matrix models based on selected models.


Create models with permuted columns from selected models.


Download the PFMs of the model(s) selected in four different formats.