JASPAR CORE

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Total 1964 profiles

Display profiles
ID Name Species Class Family Sequence logo
MA0416.1 YAP3 Saccharomyces cerevisiae Basic leucine zipper factors (bZIP)
MA0417.1 YAP5 Saccharomyces cerevisiae Basic leucine zipper factors (bZIP)
MA0418.1 YAP6 Saccharomyces cerevisiae Basic leucine zipper factors (bZIP)
MA0419.1 YAP7 Saccharomyces cerevisiae Basic leucine zipper factors (bZIP)
MA0420.1 ERT1 Saccharomyces cerevisiae C6 zinc cluster factors
MA0421.1 NSI1 Saccharomyces cerevisiae Tryptophan cluster factors Myb/SANT domain factors
MA0422.1 URC2 Saccharomyces cerevisiae C6 zinc cluster factors
MA0423.1 YER130C Saccharomyces cerevisiae C2H2 zinc finger factors Other factors with up to three adjacent zinc fingers
MA0424.1 YER184C Saccharomyces cerevisiae C6 zinc cluster factors
MA0425.1 YGR067C Saccharomyces cerevisiae C2H2 zinc finger factors Other factors with up to three adjacent zinc fingers
Showing 10 profiles of page 57 from 197 pages

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Scan

Input a (FASTA-formatted) sequence to scan with selected matrix models.

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Relative profile score threshold %

Cluster

Cluster selected models using STAMP tool.



You can use the Newick tree from results to visualize on PhyloTree

Randomize

Create random matrix models based on selected models.

Permute

Create models with permuted columns from selected models.

Download

Download the PFMs of the model(s) selected in four different formats.