JASPAR CORE

  1. Home
  2. Collection core

Total 1964 profiles

Display profiles
ID Name Species Class Family Sequence logo
MA1575.1 THRB(var.2) Homo sapiens Nuclear receptors with C4 zinc fingers Thyroid hormone receptor-related factors (NR1)
MA1576.1 THRB(var.3) Homo sapiens Nuclear receptors with C4 zinc fingers Thyroid hormone receptor-related factors (NR1)
MA1577.1 TLX2 Homo sapiens Homeo domain factors NK-related factors
MA1578.1 VEZF1 Homo sapiens C2H2 zinc finger factors More than 3 adjacent zinc finger factors
MA1579.1 ZBTB26 Homo sapiens C2H2 zinc finger factors More than 3 adjacent zinc finger factors
MA1580.1 ZBTB32 Homo sapiens C2H2 zinc finger factors Other factors with up to three adjacent zinc fingers
MA1581.1 ZBTB6 Homo sapiens C2H2 zinc finger factors More than 3 adjacent zinc finger factors
MA1583.1 ZFP57 Homo sapiens C2H2 zinc finger factors Factors with multiple dispersed zinc fingers
MA1584.1 ZIC5 Homo sapiens C2H2 zinc finger factors More than 3 adjacent zinc finger factors
MA1585.1 ZKSCAN1 Homo sapiens C2H2 zinc finger factors More than 3 adjacent zinc finger factors
MA1587.1 ZNF135 Homo sapiens C2H2 zinc finger factors More than 3 adjacent zinc finger factors
MA1588.1 ZNF136 Homo sapiens C2H2 zinc finger factors More than 3 adjacent zinc finger factors
MA1589.1 ZNF140 Homo sapiens C2H2 zinc finger factors More than 3 adjacent zinc finger factors
MA1592.1 ZNF274 Homo sapiens C2H2 zinc finger factors More than 3 adjacent zinc finger factors
MA1593.1 ZNF317 Homo sapiens C2H2 zinc finger factors More than 3 adjacent zinc finger factors
MA1594.1 ZNF382 Homo sapiens C2H2 zinc finger factors Factors with multiple dispersed zinc fingers
MA1596.1 ZNF460 Homo sapiens C2H2 zinc finger factors More than 3 adjacent zinc finger factors
MA1597.1 ZNF528 Homo sapiens C2H2 zinc finger factors More than 3 adjacent zinc finger factors
MA1599.1 ZNF682 Homo sapiens C2H2 zinc finger factors More than 3 adjacent zinc finger factors
MA1600.1 ZNF684 Homo sapiens C2H2 zinc finger factors More than 3 adjacent zinc finger factors
MA1601.1 ZNF75D Homo sapiens C2H2 zinc finger factors More than 3 adjacent zinc finger factors
MA1602.1 ZSCAN29 Homo sapiens C2H2 zinc finger factors More than 3 adjacent zinc finger factors
MA1603.1 Dmrt1 Mus musculus DM-type intertwined zinc finger factors DMRT factors
MA1604.1 Ebf2 Mus musculus Rel homology region (RHR) factors Early B-Cell Factor-related factors
MA1606.1 Foxf1 Mus musculus Fork head / winged helix factors Forkhead box (FOX) factors
Showing 25 profiles of page 75 from 79 pages

Analyze selected profiles

Please select matrix profiles on the left side to add to your cart or perform the following analysis.

Add to cart

You have 0 profile(s) in your cart. You can add profiles to the cart to download or perform analysis.
View cart

Scan

Input a (FASTA-formatted) sequence to scan with selected matrix models.

(3000 nucleotides left)
Relative profile score threshold %

Cluster

Cluster selected models using STAMP tool.



You can use the Newick tree from results to visualize on PhyloTree

Randomize

Create random matrix models based on selected models.

Permute

Create models with permuted columns from selected models.

Download

Download the PFMs of the model(s) selected in four different formats.