JASPAR CORE

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Total 1964 profiles

Display profiles
ID Name Species Class Family Sequence logo
MA0746.1 SP3 Homo sapiens C2H2 zinc finger factors Three-zinc finger Krüppel-related factors
MA0746.2 SP3 Homo sapiens C2H2 zinc finger factors Three-zinc finger Kruppel-related factors
MA0747.1 SP8 Homo sapiens C2H2 zinc finger factors Three-zinc finger Krüppel-related factors
MA0748.1 YY2 Homo sapiens C2H2 zinc finger factors More than 3 adjacent zinc finger factors
MA0748.2 YY2 Homo sapiens C2H2 zinc finger factors More than 3 adjacent zinc finger factors
MA0749.1 ZBED1 Homo sapiens C2H2 zinc finger factors BED zinc finger factors
MA0750.1 ZBTB7A Homo sapiens C2H2 zinc finger factors More than 3 adjacent zinc finger factors
MA0750.2 ZBTB7A Homo sapiens C2H2 zinc finger factors More than 3 adjacent zinc finger factors
MA0751.1 ZIC4 Homo sapiens C2H2 zinc finger factors More than 3 adjacent zinc finger factors
MA0752.1 ZNF410 Homo sapiens C2H2 zinc finger factors More than 3 adjacent zinc finger factors
Showing 10 profiles of page 98 from 197 pages

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Scan

Input a (FASTA-formatted) sequence to scan with selected matrix models.

(3000 nucleotides left)
Relative profile score threshold %

Cluster

Cluster selected models using STAMP tool.



You can use the Newick tree from results to visualize on PhyloTree

Randomize

Create random matrix models based on selected models.

Permute

Create models with permuted columns from selected models.

Download

Download the PFMs of the model(s) selected in four different formats.