Detailed information of matrix profile MA0028.2

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Profile summary
Name: ELK1
Matrix ID: MA0028.2
Class: Tryptophan cluster factors
Family: Ets-related factors
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation: 1425594
Uniprot ID: P19419  
Source: 23332764
Comment: Data is from Taipale HTSELEX DBD (2013)

Sequence logo

Frequency matrix

         
A [ 8587 45807 294 2165 25 713 26 21 236 5718 ]
C [ 17273 1123 45807 60 62 45807 45807 59 1478 12959 ]
G [ 6673 6309 2361 333 233 41 21 45807 45807 2750 ]
T [ 13274 916 3016 45807 45807 4 0 359 1217 45807 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0028.1 MA0028 1 ELK1 Homo sapiens
Ets-related factors Tryptophan cluster factors
MA0028.2 MA0028 2 ELK1 Homo sapiens
Ets-related factors Tryptophan cluster factors
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0023.1

ChIP-seq Centrality
log(P-value): -1805.85

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0023.1

ChIP-seq Centrality
log(P-value): -1804.08

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: