Detailed information of matrix profile MA0036.2

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Profile summary
Name: GATA2
Matrix ID: MA0036.2
Class: Other C4 zinc finger-type factors
Family: GATA-type zinc fingers
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Validation: 8321207
Uniprot ID: P23769  
Source: ENCODE
Comment:

Sequence logo

Frequency matrix

         
A [ 1715 544 3155 0 4380 0 4329 4188 442 2526 2377 876 778 1490 ]
C [ 224 1967 0 0 0 0 0 0 914 765 427 1220 1709 754 ]
G [ 1185 1765 0 4380 0 0 0 192 3015 1057 525 729 768 567 ]
T [ 1256 104 1225 0 0 4380 51 0 9 32 1051 1555 1125 1569 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0036.1 MA0036 1 GATA2 Homo sapiens
GATA-type zinc fingers Other C4 zinc finger-type factors
MA0036.2 MA0036 2 GATA2 Homo sapiens
GATA-type zinc fingers Other C4 zinc finger-type factors
MA0036.3 MA0036 3 GATA2 Homo sapiens
GATA-type zinc fingers Other C4 zinc finger-type factors
     

log(P-value) = -3777

TFFM details

TFFM ID: TFFM0041.1

ChIP-seq Centrality
log(P-value): -7731.69

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0041.1

ChIP-seq Centrality
log(P-value): -7447.66

TFFM detailed summary logos

Description: GATA binding protein 2

Alias: NFE1B

Symbol: GATA2

Consensus:

Included Models:

GC Content: