Detailed information of matrix profile MA0047.1

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Profile summary
Name: Foxa2
Matrix ID: MA0047.1
Class: Fork head / winged helix factors
Family: Forkhead box (FOX) factors
Collection: CORE
Taxon: Vertebrates
Species: Rattus norvegicus
Data Type: COMPILED
Validation: 8139574
Uniprot ID: P32182  
Source:
Comment:

Sequence logo

Frequency matrix

         
A [ 6 11 8 0 11 0 0 0 9 0 1 0 ]
C [ 7 3 3 1 0 1 1 0 0 9 1 5 ]
G [ 3 1 1 0 6 0 0 6 8 0 1 0 ]
T [ 1 2 5 16 0 16 16 11 0 8 14 12 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0047.1 MA0047 1 Foxa2 Rattus norvegicus
Forkhead box (FOX) factors Fork head / winged helix factors
MA0047.2 MA0047 2 Foxa2 Mus musculus
Forkhead box (FOX) factors Fork head / winged helix factors
MA0047.3 MA0047 3 FOXA2 Homo sapiens
Forkhead box (FOX) factors Fork head / winged helix factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

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