Detailed information of matrix profile MA0062.3

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Profile summary
Name: GABPA
Matrix ID: MA0062.3
Class: Tryptophan cluster factors
Family: Ets-related factors
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Validation: 9461436
Uniprot ID: Q06546  
Source: ReMap
Comment:

Sequence logo

Frequency matrix

         
A [ 15887 10981 7639 52260 929 3885 862 1398 993 1722 2219 5344 11903 13522 ]
C [ 16922 21679 41398 3988 55664 1443 1230 61373 63107 1542 6328 12006 18154 17382 ]
G [ 15945 13751 6989 4873 2169 965 1633 1150 520 4561 51920 7720 15081 13187 ]
T [ 16725 19068 9453 4358 6717 59186 61754 1558 859 57654 5012 40409 20341 21388 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0062.1 MA0062 1 GABPA Homo sapiens
Ets-related factors Tryptophan cluster factors
MA0062.2 MA0062 2 Gabpa Mus musculus
Ets-related factors Tryptophan cluster factors
MA0062.3 MA0062 3 GABPA Homo sapiens
Ets-related factors Tryptophan cluster factors
     

log(P-value) = -225.237

TFFM details

TFFM ID: TFFM0039.2

ChIP-seq Centrality
log(P-value): -13451.9

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0039.2

ChIP-seq Centrality
log(P-value): -7520.96

TFFM detailed summary logos

Description:

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GC Content: