Detailed information of matrix profile MA0109.1

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Profile summary
Name: HLTF
Matrix ID: MA0109.1
Class: Tryptophan cluster factors
Family: Myb/SANT domain factors
Collection: CORE
Taxon: Vertebrates
Species: Oryctolagus cuniculus
Data Type: SELEX
Validation: 12198246
Uniprot ID: Q95216  
Source:
Comment: updated matrix sincle last release

Sequence logo

Frequency matrix

         
A [ 16 20 26 0 25 0 24 0 15 12 ]
C [ 10 12 33 59 0 0 5 0 14 12 ]
G [ 12 5 0 0 0 0 12 22 14 10 ]
T [ 13 16 0 0 34 59 18 37 8 15 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0109.1 MA0109 1 HLTF Oryctolagus cuniculus
Myb/SANT domain factors Tryptophan cluster factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description: helicase-like transcription factor

Alias: HIP116A,HLTF1,RNF80

Symbol: HLTF

Consensus:

Included Models:

GC Content: