Detailed information of matrix profile MA0117.2

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Profile summary
Name: Mafb
Matrix ID: MA0117.2
Class: Basic leucine zipper factors (bZIP)
Family: Maf-related factors
Collection: CORE
Taxon: Vertebrates
Species: Mus musculus
Data Type: HT-SELEX
Validation: 9571165
Uniprot ID: P54841  
Source: 23332764
Comment: Data is from Taipale HTSELEX DBD (2013)

Sequence logo

Frequency matrix

         
A [ 816 273 13 170 2182 7 5 2182 611 704 639 446 ]
C [ 646 490 17 2182 2 5 2182 31 429 182 159 326 ]
G [ 138 2182 13 13 36 2182 14 618 398 216 121 174 ]
T [ 582 182 2182 45 31 295 2 264 744 1080 1263 1237 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0117.1 MA0117 1 Mafb Rattus norvegicus
Maf-related factors Basic leucine zipper factors (bZIP)
MA0117.2 MA0117 2 Mafb Mus musculus
Maf-related factors Basic leucine zipper factors (bZIP)
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0187.1

ChIP-seq Centrality
log(P-value): -11168.7

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0187.1

ChIP-seq Centrality
log(P-value): -11586.8

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: